SOCR Data April2011 NI IBS Pain - Revision history

Dinov at 15:04, 21 April 2024

2024-04-21T15:04:01Z

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Dinov: /* 56 ROI Nomenclature */

2015-03-21T16:49:32Z

‎56 ROI Nomenclature

Dinov at 15:24, 3 October 2014

2014-10-03T15:24:00Z

Dinov: /* References */

2014-10-03T11:32:41Z

‎References

Dinov: /* References */

2014-10-03T11:32:17Z

‎References

Dinov: /* Data Description */

2014-10-01T17:16:21Z

‎Data Description

Dinov: /* Data Description */

2014-10-01T17:01:47Z

‎Data Description

Dinov: /* Data Description */

2014-10-01T16:59:05Z

‎Data Description

Dinov: /* Data Table */

2014-10-01T16:52:26Z

‎Data Table

Dinov: /* Data Table */ updated the data

2014-10-01T16:51:01Z

‎Data Table: updated the data

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@@ Line 709: / Line 709: @@
 <center>
 {| class="wikitable" style="text-align:center; width:75%" border="1"
-!Index||Volume_Intensity down||ROI_Name
+!Index||Volume_Intensity||ROI_Name
 |-
 |0||0||Background

@@ Line 29: / Line 29: @@
 {| class="wikitable" style="text-align:center;" border="2"
 |-
-!Index||Age||Group||BH||Sex||BSQ_overall||BSQ_abdpain||BSQ_severity||CSQScr||ETI_Global||TAnxiety_raw||TAnxiety||TBM||GM)||WM||CSF||Background||L_superior_frontal_gyrus||R_superior_frontal_gyrus||L_middle_frontal_gyrus||R_middle_frontal_gyrus||L_inferior_frontal_gyrus||R_inferior_frontal_gyrus||L_precentral_gyrus||R_precentral_gyrus||L_middle_orbitofrontal_gyrus||R_middle_orbitofrontal_gyrus||L_lateral_orbitofrontal_gyrus||R_lateral_orbitofrontal_gyrus||L_gyrus_rectus||R_gyrus_rectus||L_postcentral_gyrus||R_postcentral_gyrus||L_superior_parietal_gyrus||R_superior_parietal_gyrus||L_supramarginal_gyrus||R_supramarginal_gyrus||L_angular_gyrus||R_angular_gyrus||L_precuneus||R_precuneus||L_superior_occipital_gyrus||R_superior_occipital_gyrus||L_middle_occipital_gyrus||R_middle_occipital_gyrus||L_inferior_occipital_gyrus||R_inferior_occipital_gyrus||L_cuneus||R_cuneus||L_superior_temporal_gyrus||R_superior_temporal_gyrus||L_middle_temporal_gyrus||R_middle_temporal_gyrus||L_inferior_temporal_gyrus||R_inferior_temporal_gyrus||L_parahippocampal_gyrus||R_parahippocampal_gyrus||L_lingual_gyrus||R_lingual_gyrus||L_fusiform_gyrus||R_fusiform_gyrus||L_insular_cortex||R_insular_cortex||L_cingulate_gyrus||R_cingulate_gyrus||L_caudate||R_caudate||L_putamen||R_putamen||L_hippocampus||R_hippocampus||cerebellum||brainstem
+!Index||Age||Group||BH||Sex||BSQ_overall||BSQ_abdpain||BSQ_severity||CSQScr||ETI_Global||TAnxiety_raw||TAnxiety||TBV||GMV||WMV||CSF||Background||L_superior_frontal_gyrus||R_superior_frontal_gyrus||L_middle_frontal_gyrus||R_middle_frontal_gyrus||L_inferior_frontal_gyrus||R_inferior_frontal_gyrus||L_precentral_gyrus||R_precentral_gyrus||L_middle_orbitofrontal_gyrus||R_middle_orbitofrontal_gyrus||L_lateral_orbitofrontal_gyrus||R_lateral_orbitofrontal_gyrus||L_gyrus_rectus||R_gyrus_rectus||L_postcentral_gyrus||R_postcentral_gyrus||L_superior_parietal_gyrus||R_superior_parietal_gyrus||L_supramarginal_gyrus||R_supramarginal_gyrus||L_angular_gyrus||R_angular_gyrus||L_precuneus||R_precuneus||L_superior_occipital_gyrus||R_superior_occipital_gyrus||L_middle_occipital_gyrus||R_middle_occipital_gyrus||L_inferior_occipital_gyrus||R_inferior_occipital_gyrus||L_cuneus||R_cuneus||L_superior_temporal_gyrus||R_superior_temporal_gyrus||L_middle_temporal_gyrus||R_middle_temporal_gyrus||L_inferior_temporal_gyrus||R_inferior_temporal_gyrus||L_parahippocampal_gyrus||R_parahippocampal_gyrus||L_lingual_gyrus||R_lingual_gyrus||L_fusiform_gyrus||R_fusiform_gyrus||L_insular_cortex||R_insular_cortex||L_cingulate_gyrus||R_cingulate_gyrus||L_caudate||R_caudate||L_putamen||R_putamen||L_hippocampus||R_hippocampus||cerebellum||brainstem
 |-
 |10||26||1||4||2||.||.||.||1.5||10||28||41||1433504||673617||581209||178678||9531827||51072||53474||46787||46722||16207||19016||25846||21156||7343||8982||5165||3555||1896||2439||17615||20072||21696||25025||11393||8659||13083||16720||10728||13303||5068||6602||13923||13583||6228||9539||4856||7048||22887||22025||18833||22899||20266||18075||6080||7170||14270||12439||11643||12536||8135||6447||12470||11518||2519||1636||3805||3226||3201||3651||144054||29347

@@ Line 828: / Line 828: @@
 == References==
-* [http://wiki.stat.ucla.edu/socr/index.php/AP_Statistics_Curriculum_2007_NonParam_2MedianPair#Comparison_and_Validation_of_Automated_Brain_Volume_Segmentation_Methods BrainPArser 56 ROI Lables and images]
+* [http://wiki.stat.ucla.edu/socr/index.php/AP_Statistics_Curriculum_2007_NonParam_2MedianPair#Comparison_and_Validation_of_Automated_Brain_Volume_Segmentation_Methods BrainParser 56 ROI Lables and images]
 * [http://digestive.niddk.nih.gov/ddiseases/pubs/ibs/Pain/IBS IBS Background]
 * [http://www.ncbi.nlm.nih.gov/pubmed/12800256 Pain Reference]

@@ Line 828: / Line 828: @@
 == References==
 * [http://digestive.niddk.nih.gov/ddiseases/pubs/ibs/Pain/IBS IBS Background]
 * [http://www.ncbi.nlm.nih.gov/pubmed/12800256 Pain Reference]

@@ Line 6: / Line 6: @@
 ==Data Description==
 * Meta-data/Phenotypes:
 ** '''AcquisitionDate''': Data of image acquisition (YYYYMMDD format)

@@ Line 15: / Line 15: @@
 ** BSQ_abdpain: abdominal pain rating
 ** BSQ_severity: Bowel Symptom Questionnaire severity
-** CSQScr: Coping Strategies Questionnaires
+** CSQScr: [http://www.sciencedirect.com/science/article/pii/0304395983901252 Coping Strategies Questionnaires]
-** ETI_Global: Early Trauma Inventory
+** ETI_Global: [http://www.ncbi.nlm.nih.gov/pubmed/17468680 Early Trauma Inventory]
-** TAnxiety_raw: trait anxiety
+** TAnxiety_raw: [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3879951/ trait anxiety]
 ** TAnxiety:trait anxiety
 * Imaging Biomarkers

@@ Line 12: / Line 12: @@
 ** '''Group''': 1=Control; 2=IBS; 3=UC (Ulcerative Colitis); 5=Crohn's disease
 ** '''ROI''': [[SOCR_Data_April2011_NI_IBS_Pain#56_ROI_Nomenclature| Region of Interest (56 ROIs + background)]]
 * Imaging Biomarkers
 ** '''Global Tissue Classes''': Total Brain Volume (TBV), Gray Matter Volume (GMV), White Matter Volume (WMV), and Cerebrospinal Fluid (CSF) volume