SOCR EduMaterials AnalysesCommandLineChiSquareContingencyTable - Revision history

IvoDinov: /* Example Input data files */

2008-12-03T00:09:01Z

‎Example Input data files

IvoDinov: /* Example Input data files */

2008-12-03T00:08:47Z

‎Example Input data files

IvoDinov: /* Example Input data files */

2008-12-03T00:08:15Z

‎Example Input data files

IvoDinov: completely redesinged

2008-12-03T00:07:27Z

completely redesinged

IvoDinov at 22:00, 2 December 2008

2008-12-02T22:00:45Z

Teresalam: New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Friedman Test] library via shell-based command-line interface on local machines. More...

2008-03-06T21:50:00Z

New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Friedman Test] library via shell-based command-line interface on local machines. More...

New page

This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Friedman Test] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].

== Introduction ==
In addition to the graphical user interfaces, via a web-browser, all [http://socr.ucla.edu/htmls/SOCR_Analyses.html SOCR Analyses] allow command-line shell execution on local systems.

==General Usage==
* Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
* The command-line interface to SOCR Analyses generally uses '''EXAMPLE 1''' from the list of example data files for the corresponding analysis.
* All Input files are ASCII (see examples within each of the specific analyses).
* a '''-h''' flag at the end of the command-line indicates that the first row in all ASCII input data files is a '''HEADER''' row (so it's not interpreted as data)
* Number of variables have to be indicated at the end (after '''-h''' flag). If no number of variable is included, 5 is set defaulted.

==Friedman Test Usage==
* Generic Setting:
<code>
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.TwoIndependentFriedmanCSV [data_location]/f.txt -h [number_of_variables] 5
</code>

* Example: Edit a new file (TwoIndependentFriedmanCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
<code>#!/bin/csh</code>

<code>date</code>

<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
stat.SOCR.analyses.command.TwoIndependentFriedmanCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/f.txt -h 5</code>

<code>date</code>

<code>exit</code>

==Example Input data files==
One test datafile is included with the SOCR analyses command-line distribution (f.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.

<center>
{| class="wikitable" style="text-align:center" border="1" cellpadding="2"
|-
!
!
!
! f.txt
!
|-
| A
| B
| C
| D
| E
|-
| 5.0
| 4.0
| 7.0
| 10.0
| 12.0
|-
| 1.0
| 3.0
| 1.0
| 0.0
| 2.0
|-
| 16.0
| 12.0
| 22.0
| 22.0
| 35.0
|-
| 5.0
| 4.0
| 3.0
| 5.0
| 4.0
|-
| 10.0
| 9.0
| 7.0
| 13.0
| 10.0
|-
| 19.0
| 18.0
| 18.0
| 37.0
| 58.0
|-
| 10.0
| 7.0
| 6.0
| 8.0
| 7.0
|}
</center>

{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoIndependentFriedman}}

@@ Line 34: / Line 34: @@
 {| class="wikitable" style="text-align:center" border="1" cellpadding="2"
 |-
-! colspan=5| c.txt
+! colspan=2| c.txt
 |-
 | 1 || 2

@@ Line 36: / Line 36: @@
 ! colspan=5| c.txt
 |-
-| Row-Index || Column1 || Column2
+| 1 || 2
 |-
-| 1 || 1 || 2
+| 3 || 4
 |}
 </center>
 {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineChiSquareContingencyTable}}

@@ Line 34: / Line 34: @@
 {| class="wikitable" style="text-align:center" border="1" cellpadding="2"
 |-
-! colspan=5| f.txt
+! colspan=5| c.txt
 |-
 | Row-Index || Column1 || Column2
 |-
-| 1 || 2
+| 1 || 1 || 2
 |-
-| 3 || 4
+| 2 || 3 || 4
 |}
 </center>
 {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineChiSquareContingencyTable}}

@@ Line 1: / Line 1: @@
-This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Friedman Test] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].
+This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Chi-Square Contingency Table] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].
 == Introduction ==
@@ Line 11: / Line 11: @@
 * Number of variables have to be indicated at the end (after '''-h''' flag). If no number of variables is included, 5 is set defaulted.
-==Friedman Test Usage==
+==[http://en.wikipedia.org/wiki/Contingency_table Chi-Square Contingency Table] Usage==
 * Generic Setting:
 <code>
-java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.TwoIndependentFriedmanCSV [data_location]/f.txt -h [number_of_variables] 5
+java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.ChiSquareContingencyTableCSV [data_location]/c.txt -h
 </code>
-* Example: Edit a new file (TwoIndependentFriedmanCSV.csh) using any editor and paste this inside (make sure the file has executable permissions). Some operating systems/platforms may require variants of this (C-shell) script.
+* Example: Edit a new file (ChiSquareContingencyTableCSV.csh) using any editor and paste this inside (make sure the file has executable permissions). Some operating systems/platforms may require variants of this (C-shell) script.
 <code>#!/bin/csh</code>
 <code>date</code>
-<code>java -cp /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
+<code>java -cp /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.ChiSquareContingencyTableCSV /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/c.txt -h</code>
 <code>date</code>
@@ Line 31: / Line 29: @@
 ==Example Input data files==
-One test datafile is included with the SOCR analyses command-line distribution (f.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
+One test datafile is included with the SOCR analyses command-line distribution (c.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
 <center>
@@ Line 38: / Line 36: @@
 ! colspan=5| f.txt
 |-
-| A
+| Row-Index || Column1 || Column2
 |-
-| 5.0
+| 1 || 2
 |-
-| 1.0
+| 3 || 4
 |}
 </center>
 {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineChiSquareContingencyTable}}

@@ Line 9: / Line 9: @@
 * All Input files are ASCII (see examples within each of the specific analyses).
 * a '''-h''' flag at the end of the command-line indicates that the first row in all ASCII input data files is a '''HEADER''' row (so it's not interpreted as data)
-* Number of variables have to be indicated at the end (after '''-h''' flag). If no number of variable is included, 5 is set defaulted.
+* Number of variables have to be indicated at the end (after '''-h''' flag). If no number of variables is included, 5 is set defaulted.
 ==Friedman Test Usage==
@@ Line 17: / Line 17: @@
 </code>
-* Example: Edit a new file (TwoIndependentFriedmanCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
+* Example: Edit a new file (TwoIndependentFriedmanCSV.csh) using any editor and paste this inside (make sure the file has executable permissions). Some operating systems/platforms may require variants of this (C-shell) script.
 <code>#!/bin/csh</code>
 <code>date</code>
-<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
+<code>java -cp /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
-cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
+ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
-stat.SOCR.analyses.command.TwoIndependentFriedmanCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
+stat.SOCR.analyses.command.TwoIndependentFriedmanCSV /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/f.txt -h 5</code>
 <code>date</code>
@@ Line 37: / Line 36: @@
 {| class="wikitable" style="text-align:center" border="1" cellpadding="2"
 |-
+! colspan=5| f.txt
 |-
 | A
@@ Line 93: / Line 88: @@
 </center>
-{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoIndependentFriedman}}
+{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineChiSquareContingencyTable}}