SOCR EduMaterials AnalysesCommandLineSimpleRegression - Revision history

IvoDinov at 00:59, 3 December 2008

2008-12-03T00:59:00Z

IvoDinov: /* Simple Regression Usage */ formating typo

2008-03-21T17:42:50Z

‎Simple Regression Usage: formating typo

IvoDinov: /* Simple Regression Usage */ fixed line-break typo

2008-03-20T23:36:16Z

‎Simple Regression Usage: fixed line-break typo

Teresalam: /* Example Input data files */

2008-03-05T23:42:03Z

‎Example Input data files

Teresalam at 23:41, 5 March 2008

2008-03-05T23:41:17Z

Teresalam: New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html ANOVA - One Way] library via shell-based command-line interface on local machines. Mo...

2008-03-05T23:35:03Z

New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html ANOVA - One Way] library via shell-based command-line interface on local machines. Mo...

New page

This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html ANOVA - One Way] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].

== Introduction ==
In addition to the graphical user interfaces, via a web-browser, all [http://socr.ucla.edu/htmls/SOCR_Analyses.html SOCR Analyses] allow command-line shell execution on local systems.

==General Usage==
* Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
* The command-line interface to SOCR Analyses generally uses '''EXAMPLE 1''' from the list of example data files for the corresponding analysis.
* All Input files are ASCII (see examples within each of the specific analyses).
* a '''-h''' flag at the end of the command-line indicates that the first row in all ASCII input data files is a '''HEADER''' row (so it's not interpreted as data)

==ANOVA - One Way Usage==
* Generic Setting:
<code>
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV [data_location]/test.txt -h
</code>

* Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
<code>#!/bin/csh</code>

<code>date</code>

<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h</code>

<code>date</code>

<code>exit</code>

==Example Input data files==
One test datafile is included with the SOCR analyses command-line distribution ('''test.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.

<center>
{| class="wikitable" style="text-align:center" border="1" cellpadding="2"
|-
! test.txt
!
|-
| x
| y
|-
| 93.0
| 1
|-
| 67.0
| 1
|-
| 77.0
| 1
|-
| 92.0
| 1
|-
| 97.0
| 1
|-
| 62.0
| 1
|-
| 136.0
| 2
|-
| 120.0
| 2
|-
| 115.0
| 2
|-
| 121.0
| 2
|-
| 102.0
| 2
|-
| 130.0
| 2
|-
| 198.0
| 3
|-
| 217.0
| 3
|-
| 209.0
| 3
|-
| 221.0
| 3
|-
| 190.0
| 3
|}
</center>

{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}}

@@ Line 17: / Line 17: @@
 </code>
-* Example: Edit a new file (SimpleRegressionCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
+* Example: Edit a new file (SimpleRegressionCSV.csh) using any editor and paste this inside (make sure the file has executable permissions). Some operating systems/platforms may require variants of this (C-shell) script.
 <code>#!/bin/csh</code>
 <code>date</code>
-<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.SimpleRegressionCSV /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/reg.txt -h</code>
+<code>java -cp /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.SimpleRegressionCSV /ifs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/reg.txt -h</code>
 <code>date</code>

@@ Line 32: / Line 32: @@
 ==Example Input data files==
-One test datafile is included with the SOCR analyses command-line distribution ('''test.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
+One test datafile is included with the SOCR analyses command-line distribution ('''reg.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
 <center>
@@ Line 72: / Line 72: @@
 </center>
-{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}}
+{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineSimpleRegression}}

@@ Line 1: / Line 1: @@
-This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html ANOVA - One Way] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].
+This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Simple Regression] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].
 == Introduction ==
@@ Line 11: / Line 11: @@
-==ANOVA - One Way Usage==
+==Simple Regression Usage==
 * Generic Setting:
 <code>
-java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.AnovaOneWayCSV [data_location]/test.txt -h
+java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.SimpleRegressionCSV [data_location]/reg.txt -h
 </code>
-* Example: Edit a new file (AnovaOneWayCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
+* Example: Edit a new file (SimpleRegressionCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
 <code>#!/bin/csh</code>
@@ Line 24: / Line 24: @@
 <code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
 cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
-stat.SOCR.analyses.command.AnovaOneWayCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
+stat.SOCR.analyses.command.SimpleRegressionCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
-ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/test.txt -h</code>
+ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/reg.txt -h</code>
 <code>date</code>
@@ Line 37: / Line 37: @@
 {| class="wikitable" style="text-align:center" border="1" cellpadding="2"
 |-
-! test.txt
+! reg.txt
+!
 |-
@@ Line 43: / Line 43: @@
 | y
 |-
-| 93.0
+| 82.0
-| 1
+| 85.0
 |-
-| 67.0
+| 97.0
-| 1
+| 98.0
 |-
-| 77.0
+| 93.0
-| 1
+| 102.0
 |-
-| 92.0
+| 75.0
-| 1
+| 80.0
 |-
-| 97.0
+| 87.0
-| 1
+| 90.0
 |-
-| 62.0
+| 130.0
-| 1
+| 135.0
 |-
-| 136.0
+| 125.0
-| 2
+| 135.0
 |-
-| 120.0
+| 126.0
-| 2
+| 131.0
 |-
-| 115.0
+| 104.0
-| 2
+| 110.0
 |}
 </center>
 {{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}}