Difference between revisions of "SOCR EduMaterials AnalysesCommandLineTwoIndependentText"

From SOCR
Jump to: navigation, search
(New page: This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Two Independent Sample T Test SOCR Analyses] library via shell-based command-line int...)
 
 
(3 intermediate revisions by 3 users not shown)
Line 1: Line 1:
This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Two Independent Sample T Test SOCR Analyses] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]].
+
#REDIRECT [[SOCR_EduMaterials_AnalysesCommandLineTwoIndependentTest]]
 
 
== Introduction ==
 
In addition to the graphical user interfaces, via a web-browser, all [http://socr.ucla.edu/htmls/SOCR_Analyses.html SOCR Analyses] allow command-line shell execution on local systems.
 
 
 
==General Usage==
 
* Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
 
* The command-line interface to SOCR Analyses generally uses '''EXAMPLE 1''' from the list of example data files for the corresponding analysis.
 
* All Input files are ASCII (see examples within each of the specific analyses).
 
* a '''-h''' flag at the end of the command-line indicates that the first row in all ASCII input data files is a '''HEADER''' row (so it's not interpreted as data)
 
 
 
 
 
==Two Independent Sample T Test Usage==
 
* Generic Setting:
 
<code>
 
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.TwoPairSignedRankCSV [data_location]/rank1.txt [data_location]/rank2.txt -h
 
</code>
 
 
 
* Example: Edit a new file (ChiSquareModelFitCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
 
<code>#!/bin/csh</code>
 
 
 
<code>date</code>
 
 
 
<code>java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
 
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
 
stat.SOCR.analyses.command.TwoPairSignedRankCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
 
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/rank1.txt /cxfs/ccb/CCB_SW_Tools/others/S
 
tatistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/rank2.txt -h</code>
 
 
 
<code>date</code>
 
 
 
<code>exit</code>
 
 
 
==Example Input data files==
 
Two test datafiles are included with the SOCR analyses command-line distribution ('''rank1.txt''' and '''rank2.txt'''). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
 
 
 
<center>
 
{| class="wikitable" style="text-align:center" border="1" cellpadding="2"
 
|-
 
! rank1.txt
 
! rank2.txt
 
|-
 
| Before
 
| After
 
|-
 
| 27.0
 
| 25.0
 
|-
 
| 29.0
 
| 25.0
 
|-
 
| 37.0
 
| 27.0
 
|-
 
| 56.0
 
| 44.0
 
|-
 
| 46.0
 
| 30.0
 
|-
 
| 82.0
 
| 67.0
 
|-
 
| 57.0
 
| 53.0
 
|-
 
| 80.0
 
| 53.0
 
|-
 
| 61.0
 
| 52.0
 
|-
 
| 59.0
 
| 60.0
 
|-
 
| 43.0
 
| 28.0
 
|}
 
</center>
 
 
 
{{translate|pageName=http://wiki.stat.ucla.edu/socr/index.php?title=SOCR_EduMaterials_AnalysesCommandLineTwoPairSignedRank}}
 

Latest revision as of 19:52, 2 December 2008