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Revision as of 17:48, 6 March 2008
This page includes the information on how to access the Two Independent Kruskal Wallis Test library via shell-based command-line interface on local machines. More information about other SOCR Analyses command-line interfaces is available here.
Contents
Introduction
In addition to the graphical user interfaces, via a web-browser, all SOCR Analyses allow command-line shell execution on local systems.
General Usage
- Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
- The command-line interface to SOCR Analyses generally uses EXAMPLE 1 from the list of example data files for the corresponding analysis.
- All Input files are ASCII (see examples within each of the specific analyses).
- a -h flag at the end of the command-line indicates that the first row in all ASCII input data files is a HEADER row (so it's not interpreted as data)
- Number of variables have to be indicated at the end (after -h flag). If no number of variable is included, 4 is set defaulted.
Two Independent Kruskal Wallis Test Usage
- Generic Setting:
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.TwoIndependentKruskalWallisCSV [data_location]/kw.txt -h [number_of_variables] 4
- Example: Edit a new file (TwoIndependentKruskalWallisCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
#!/bin/csh
date
java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
stat.SOCR.analyses.command.TwoIndependentKruskalWallisCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/kw.txt -h 4
date
exit
Example Input data files
One test datafile is included with the SOCR analyses command-line distribution (kw.txt). The ASCII content of each of these is included below. Note that the first lines in these files are column headers. This requires the "-h" flag at the end of the command line execution so that these first lines are interpreted as column headers.
| kw.txt | ||||
|---|---|---|---|---|
| A | B | C | D | |
| 59.8 | 59.8 | 60.7 | 61.0 | |
| 60.0 | 60.2 | 60.7 | 60.8 | |
| 60.8 | 60.4 | 60.5 | 60.6 | |
| 60.8 | 59.9 | 60.9 | 60.5 | |
| 59.8 | 60.0 | 60.3 | 60.5 |
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