Difference between revisions of "SOCR EduMaterials AnalysesCommandLineChiSquareModelFit"
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This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Chi-Square Model-Fit SOCR Analyses] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]]. | This page includes the information on how to access the [http://socr.ucla.edu/htmls/SOCR_Analyses.html Chi-Square Model-Fit SOCR Analyses] library via shell-based command-line interface on local machines. More information about [[SOCR_EduMaterials_AnalysesCommandLine | other SOCR Analyses command-line interfaces is available here]]. | ||
| − | + | == Introduction == | |
| − | |||
In addition to the graphical user interfaces, via a web-browser, all [http://socr.ucla.edu/htmls/SOCR_Analyses.html SOCR Analyses] allow command-line shell execution on local systems. | In addition to the graphical user interfaces, via a web-browser, all [http://socr.ucla.edu/htmls/SOCR_Analyses.html SOCR Analyses] allow command-line shell execution on local systems. | ||
| − | + | ==General Usage== | |
* Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/). | * Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/). | ||
* The command-line interface to SOCR Analyses generally uses '''EXAMPLE 1''' from the list of example data files for the corresponding analysis. | * The command-line interface to SOCR Analyses generally uses '''EXAMPLE 1''' from the list of example data files for the corresponding analysis. | ||
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* A sharp/pound (#) symbol at the beginning of a line in the data files indicates a comment and this line is not interpreted as data. | * A sharp/pound (#) symbol at the beginning of a line in the data files indicates a comment and this line is not interpreted as data. | ||
| − | + | ==Chi-Square Goodness of Fit Model Usage== | |
* Generic Setting: | * Generic Setting: | ||
<code> | <code> | ||
Revision as of 18:46, 1 December 2007
This page includes the information on how to access the Chi-Square Model-Fit SOCR Analyses library via shell-based command-line interface on local machines. More information about other SOCR Analyses command-line interfaces is available here.
Introduction
In addition to the graphical user interfaces, via a web-browser, all SOCR Analyses allow command-line shell execution on local systems.
General Usage
- Get the latest SOCR JAR files from the SOCR page (http://socr.ucla.edu/htmls/jars/).
- The command-line interface to SOCR Analyses generally uses EXAMPLE 1 from the list of example data files for the corresponding analysis.
- All Input files are ASCII (see examples within each of the specific analyses).
- a -t flag at the end of the command-line indicates that the first row in all ASCII input data files is a HEADER row (so it's not interpreted as data)
- A sharp/pound (#) symbol at the beginning of a line in the data files indicates a comment and this line is not interpreted as data.
Chi-Square Goodness of Fit Model Usage
- Generic Setting:
java -cp [SOCRjar_location]/SOCR_core.jar:[SOCRjar_location]/SOCR_plugin.jar edu.ucla.stat.SOCR.analyses.command.ChiSquareModelFitCSV [data_location]/c1.txt [data_location]/c2.txt -t 1
- Example: Edit a new file (ChiSquareModelFitCSV.csh) using any editor and paste this inside (make sure the file has executable permisions). Some operating systems/platforms may require variants of this (C-shell) script.
#!/bin/csh
date
java -cp /cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_core.jar:/
cxfs/ccb/CCB_SW_Tools/others/Statistics/SOCR_Statistics/bin/SOCR_plugin.jar edu.ucla.
stat.SOCR.analyses.command.ChiSquareModelFitCSV /cxfs/ccb/CCB_SW_Tools/others/Statist
ics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/c1.txt /cxfs/ccb/CCB_SW_Tools/others/S
tatistics/SOCR_Statistics/SOCR_CSV_test_Scripts_Data/c2.txt -t 1
date
exit
- Example Input data files:
| c1.txt | c2.txt |
|---|---|
| OBS | EXP |
| 18.0 | 12.2 |
| 28.0 | 27.0 |
| 56.0 | 56.5 |
| 105.0 | 94.9 |
| 126.0 | 132.7 |
| 146.0 | 159.1 |
| 164.0 | 166.9 |
| 161.0 | 155.6 |
| 123.0 | 130.6 |
| 101.0 | 99.7 |
| 74.0 | 69.7 |
| 53.0 | 45.0 |
| 23.0 | 27.0 |
| 15.0 | 15.1 |
| 9.0 | 7.9 |
| 5.0 | 7.9 |
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